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Genetic Clues to Chordoma Etiology: A Protocol to Identify Sporadic Chordoma Patients for Studies of Cancer-Susceptibility Genes

6 Years
Open (Enrolling)

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Trial Information

Genetic Clues to Chordoma Etiology: A Protocol to Identify Sporadic Chordoma Patients for Studies of Cancer-Susceptibility Genes


Chordoma is a rare, slow growing, often fatal bone cancer derived from notochord remnants.
It occurs in the axial skeleton (skull base, vertebrae, sacrum, coccyx), is more frequent in
males, and has a median age at diagnosis of 58.5 years, with a wide age range. This
typically sporadic tumor is often advanced at presentation, and mortality is high due to
local recurrence or distant metastases. The usual treatment is surgery, followed by adjuvant
radiation therapy. Chemotherapy has not had a significant treatment role. Reports of a few
families with two or more relatives with chordoma support an etiologic role for chordoma
susceptibility genes. We determined that T-gene duplications co-segregated with disease in
four multiplex chordoma families. The T gene encodes brachyury, a tissue-specific
transcription factor expressed in notochord cells that is essential for notochord formation
and maintenance. The other chordoma families that we studied did not have T-gene
duplications; chordomas in these families may result from changes in other susceptibility
genes or other types of T-gene mutations. We are continuing gene identification studies of
multiplex chordoma families under NIH protocol 78-C-0039. We also want to determine whether
alterations in any identified chordoma susceptibility genes are associated with sporadic
chordoma in the general populations of the U.S. and Canada.


The major goal of this protocol is to identify sporadic chordoma patients willing to provide
germline and tumor DNA for studies to determine the frequency of alterations in chordoma
susceptibility genes. Our previous protocols with SEER and Massachusetts General Hospital to
identify chordoma patients were limited to residents of specific regions (2 states and 2
metropolitan areas) or to patients with pediatric skull base tumors. This protocol will
enroll patients who more broadly represent the age, site and gender distributions of
sporadic chordoma in the general population.


Eligible patients are males and females with chordoma diagnosed at any age and at any
primary site. Because we want to obtain saliva from all participants, eligibility is limited
to patients who will be greater than or equal to age 6 years at time of enrollment.


The study description and contact information including an e-mail link to the study contact
person will be posted on web sites of two chordoma support groups. We will mail study
information to be given to patients to colleagues at major medical centers that treat

The components of the study will be carried out in subjects' homes using materials mailed to
them. Up to 100 participants will: 1) complete a self-administered Personal and Family
Medical Questionnaire, 2) collect saliva using a saliva collection kit, and 3) provide
permission to obtain medical/pathology records, and paraffin blocks or slides on each
primary chordoma. Parents will serve as proxies for minor children.

We will recontact patients who report chordoma in at least one blood relative. If we confirm
the relative's chordoma diagnosis, we will invite the study subject and selected family
members to participate in clinical and gene mapping studies under protocol 78-C-0039. We may
also recontact study participants to tell them about any new studies on chordoma etiology.
They can decide at that time whether they want to participate in them.

Inclusion Criteria


- To be eligible subjects must be at least 6 years old at the time of enrollment, be
the only person in their family ever diagnosed with chordoma, and reside in the U.S
or Canada.

- Chordoma in the patients can have been diagnosed at any age and any primary site.

Type of Study:


Study Design:


Principal Investigator

Alisa M Goldstein, Ph.D.

Investigator Role:

Principal Investigator

Investigator Affiliation:

National Cancer Institute (NCI)


United States: Federal Government

Study ID:




Start Date:

August 2010

Completion Date:

Related Keywords:

  • Chordoma
  • Sporadic Chordoma
  • Pediatric and Adult
  • Gene Identification
  • Rare Bone Cancer
  • All Chordoma Sites
  • Bone Cancer
  • Chordoma
  • Disease Susceptibility



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